Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.33■□□□□ 0.85
TM9SF3Q9HD45 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF3Q9HD45 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.33■□□□□ 0.84
TM9SF3Q9HD45 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
TM9SF3Q9HD45 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM9SF3Q9HD45 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 AL121603.2-201ENST00000557373 2117 ntBASIC20.32■□□□□ 0.84
TM9SF3Q9HD45 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 Z99916.2-201ENST00000604037 246 ntBASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM9SF3Q9HD45 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 AC087633.2-202ENST00000565166 1439 ntBASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 MIR4497-201ENST00000583208 89 ntBASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TM9SF3Q9HD45 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TM9SF3Q9HD45 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TM9SF3Q9HD45 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 AC244015.2-201ENST00000616358 1861 ntBASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM9SF3Q9HD45 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms