Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 MIR1224-201ENST00000408193 85 ntBASIC21.05■□□□□ 0.96
BRD9Q9H8M2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 AC110285.5-201ENST00000611501 352 ntBASIC21.05■□□□□ 0.96
BRD9Q9H8M2 AL049637.2-201ENST00000641778 930 ntBASIC21.05■□□□□ 0.96
BRD9Q9H8M2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 AC244015.2-201ENST00000616358 1861 ntBASIC21.05■□□□□ 0.96
BRD9Q9H8M2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 AL135905.2-201ENST00000584934 1404 ntBASIC21.04■□□□□ 0.96
BRD9Q9H8M2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 KRASP1-201ENST00000407852 552 ntBASIC21.04■□□□□ 0.96
BRD9Q9H8M2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.04■□□□□ 0.96
BRD9Q9H8M2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 AL356652.1-201ENST00000615962 565 ntBASIC21.03■□□□□ 0.96
BRD9Q9H8M2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.03■□□□□ 0.96
BRD9Q9H8M2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BRD9Q9H8M2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BRD9Q9H8M2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BRD9Q9H8M2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRD9Q9H8M2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21■□□□□ 0.95
BRD9Q9H8M2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
BRD9Q9H8M2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms