Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.61■■□□□ 1.05
NSUN3Q9H649 GUSBP5-202ENST00000510805 1989 ntBASIC21.61■■□□□ 1.05
NSUN3Q9H649 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NSUN3Q9H649 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NSUN3Q9H649 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.6■■□□□ 1.05
NSUN3Q9H649 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 EP400NL-214ENST00000641289 2402 ntBASIC21.59■■□□□ 1.05
NSUN3Q9H649 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.59■■□□□ 1.05
NSUN3Q9H649 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 AC079834.2-201ENST00000609776 1949 ntBASIC21.59■■□□□ 1.05
NSUN3Q9H649 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NSUN3Q9H649 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 KRT16P5-201ENST00000455284 522 ntBASIC21.58■■□□□ 1.05
NSUN3Q9H649 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 AL356652.1-201ENST00000615962 565 ntBASIC21.58■■□□□ 1.05
NSUN3Q9H649 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NSUN3Q9H649 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
NSUN3Q9H649 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NSUN3Q9H649 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NSUN3Q9H649 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NSUN3Q9H649 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 FAM197Y1-201ENST00000421178 764 ntBASIC21.57■■□□□ 1.04
NSUN3Q9H649 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.57■■□□□ 1.04
NSUN3Q9H649 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.57■■□□□ 1.04
NSUN3Q9H649 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.57■■□□□ 1.04
NSUN3Q9H649 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.57■■□□□ 1.04
NSUN3Q9H649 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.57■■□□□ 1.04
NSUN3Q9H649 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NSUN3Q9H649 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 AC005521.1-201ENST00000393351 872 ntBASIC21.56■■□□□ 1.04
NSUN3Q9H649 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NSUN3Q9H649 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NSUN3Q9H649 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.55■■□□□ 1.04
NSUN3Q9H649 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.55■■□□□ 1.04
NSUN3Q9H649 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NSUN3Q9H649 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms