Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CUEDC2Q9H467 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 AC007322.1-201ENST00000426983 750 ntBASIC22.68■■□□□ 1.22
CUEDC2Q9H467 CYP2T1P-201ENST00000432607 1285 ntBASIC22.68■■□□□ 1.22
CUEDC2Q9H467 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 AC069236.1-201ENST00000604339 616 ntBASIC22.68■■□□□ 1.22
CUEDC2Q9H467 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.68■■□□□ 1.22
CUEDC2Q9H467 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CUEDC2Q9H467 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 DPP3P2-201ENST00000416030 1696 ntBASIC22.66■■□□□ 1.22
CUEDC2Q9H467 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CUEDC2Q9H467 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 SMG8-203ENST00000578922 2178 ntBASIC22.65■■□□□ 1.22
CUEDC2Q9H467 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 OR10C1-204ENST00000622521 1039 ntBASIC22.65■■□□□ 1.22
CUEDC2Q9H467 AC008694.1-202ENST00000636953 945 ntBASIC22.65■■□□□ 1.22
CUEDC2Q9H467 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.65■■□□□ 1.22
CUEDC2Q9H467 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CUEDC2Q9H467 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CUEDC2Q9H467 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CUEDC2Q9H467 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CUEDC2Q9H467 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CUEDC2Q9H467 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms