Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 TCF3P1-201ENST00000423021 1937 ntBASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD4Q9H0A8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.89■□□□□ 0.46
COMMD4Q9H0A8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 AC091305.1-201ENST00000479476 895 ntBASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 AL354811.1-201ENST00000610286 706 ntBASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 KRT16P2-201ENST00000414673 1423 ntBASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD4Q9H0A8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 KRT87P-202ENST00000534226 1464 ntBASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 MIR939-201ENST00000401314 82 ntBASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 AC079140.4-201ENST00000507448 529 ntBASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 RARRES2P11-201ENST00000635158 484 ntBASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.88■□□□□ 0.45
COMMD4Q9H0A8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 AF213884.3-201ENST00000563833 479 ntBASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 TPRG1LP1-201ENST00000598702 760 ntBASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 AL031432.3-201ENST00000607698 485 ntBASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD4Q9H0A8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms