Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 AC006015.1-201ENST00000429970 570 ntBASIC18.66■□□□□ 0.58
TRIM2Q9C040 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 FAM21FP-204ENST00000608637 956 ntBASIC18.66■□□□□ 0.58
TRIM2Q9C040 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM2Q9C040 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM2Q9C040 SLC25A24-204ENST00000569674 2357 ntBASIC18.66■□□□□ 0.58
TRIM2Q9C040 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 AL162377.1-201ENST00000618844 1793 ntBASIC18.65■□□□□ 0.58
TRIM2Q9C040 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 KRT18P11-201ENST00000435214 1283 ntBASIC18.65■□□□□ 0.58
TRIM2Q9C040 AC137761.2-201ENST00000561729 223 ntBASIC18.65■□□□□ 0.58
TRIM2Q9C040 AC145350.3-201ENST00000569033 163 ntBASIC18.65■□□□□ 0.58
TRIM2Q9C040 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM2Q9C040 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM2Q9C040 AC138932.1-201ENST00000534164 6830 ntBASIC18.65■□□□□ 0.58
TRIM2Q9C040 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM2Q9C040 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM2Q9C040 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.57
TRIM2Q9C040 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM2Q9C040 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM2Q9C040 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 AC016769.1-201ENST00000409132 1010 ntBASIC18.63■□□□□ 0.57
TRIM2Q9C040 TERF1P5-201ENST00000477545 1207 ntBASIC18.63■□□□□ 0.57
TRIM2Q9C040 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM2Q9C040 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM2Q9C040 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms