Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 MIR6821-201ENST00000617625 74 ntBASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 AL158211.5-201ENST00000623583 2518 ntBASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RSPO3Q9BXY4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 AC016405.3-201ENST00000607710 860 ntBASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RSPO3Q9BXY4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 AC034268.1-201ENST00000441047 882 ntBASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 TERF1P5-201ENST00000477545 1207 ntBASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 AC010536.3-201ENST00000620306 533 ntBASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RSPO3Q9BXY4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 AC026271.2-201ENST00000428091 497 ntBASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RSPO3Q9BXY4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms