Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRFN3Q9BTN0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRFN3Q9BTN0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 AL671277.2-201ENST00000458060 996 ntBASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRFN3Q9BTN0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 AC011558.1-201ENST00000623459 338 ntBASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRFN3Q9BTN0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AC130371.2-201ENST00000619443 611 ntBASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRFN3Q9BTN0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
LRFN3Q9BTN0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 MESTP1-201ENST00000404287 994 ntBASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRFN3Q9BTN0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms