Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 AC079598.2-202ENST00000546624 1451 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 CLDN5-201ENST00000403084 2357 ntBASIC17.15■□□□□ 0.34
FOXC2Q99958 KRT8P9-201ENST00000558927 1449 ntBASIC17.15■□□□□ 0.34
FOXC2Q99958 AC073508.3-201ENST00000619697 1419 ntBASIC17.15■□□□□ 0.34
FOXC2Q99958 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXC2Q99958 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXC2Q99958 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXC2Q99958 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 AP000525.1-201ENST00000608286 694 ntBASIC17.15■□□□□ 0.34
FOXC2Q99958 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.15■□□□□ 0.34
FOXC2Q99958 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
FOXC2Q99958 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXC2Q99958 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
FOXC2Q99958 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXC2Q99958 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FOXC2Q99958 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXC2Q99958 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FOXC2Q99958 MIR1238-201ENST00000408483 83 ntBASIC17.14■□□□□ 0.33
FOXC2Q99958 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXC2Q99958 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
FOXC2Q99958 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXC2Q99958 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXC2Q99958 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXC2Q99958 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXC2Q99958 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXC2Q99958 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.13■□□□□ 0.33
FOXC2Q99958 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXC2Q99958 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXC2Q99958 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXC2Q99958 REXO1L10P-201ENST00000615707 1290 ntBASIC17.13■□□□□ 0.33
FOXC2Q99958 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXC2Q99958 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXC2Q99958 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FOXC2Q99958 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXC2Q99958 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXC2Q99958 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 SLC25A3P1-201ENST00000443844 931 ntBASIC17.12■□□□□ 0.33
FOXC2Q99958 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXC2Q99958 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXC2Q99958 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXC2Q99958 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
FOXC2Q99958 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXC2Q99958 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms