Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAD9AQ99638 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAD9AQ99638 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RAD9AQ99638 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAD9AQ99638 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.83■■□□□ 1.09
RAD9AQ99638 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAD9AQ99638 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAD9AQ99638 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAD9AQ99638 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAD9AQ99638 RBM17P1-201ENST00000453646 1190 ntBASIC21.83■■□□□ 1.09
RAD9AQ99638 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD9AQ99638 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RAD9AQ99638 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.83■■□□□ 1.09
RAD9AQ99638 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.83■■□□□ 1.08
RAD9AQ99638 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAD9AQ99638 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.82■■□□□ 1.08
RAD9AQ99638 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.82■■□□□ 1.08
RAD9AQ99638 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.82■■□□□ 1.08
RAD9AQ99638 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RAD9AQ99638 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RAD9AQ99638 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.82■■□□□ 1.08
RAD9AQ99638 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAD9AQ99638 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD9AQ99638 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD9AQ99638 UNC93B2-201ENST00000285383 730 ntBASIC21.81■■□□□ 1.08
RAD9AQ99638 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 AC005521.1-201ENST00000393351 872 ntBASIC21.81■■□□□ 1.08
RAD9AQ99638 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.81■■□□□ 1.08
RAD9AQ99638 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAD9AQ99638 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD9AQ99638 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 NUDT16P1-203ENST00000513809 620 ntBASIC21.81■■□□□ 1.08
RAD9AQ99638 AC023632.3-201ENST00000521633 145 ntBASIC21.81■■□□□ 1.08
RAD9AQ99638 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.81■■□□□ 1.08
RAD9AQ99638 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.81■■□□□ 1.08
RAD9AQ99638 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAD9AQ99638 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAD9AQ99638 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD9AQ99638 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.8■■□□□ 1.08
RAD9AQ99638 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RAD9AQ99638 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RAD9AQ99638 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.8■■□□□ 1.08
RAD9AQ99638 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD9AQ99638 AC079598.2-202ENST00000546624 1451 ntBASIC21.8■■□□□ 1.08
RAD9AQ99638 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD9AQ99638 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD9AQ99638 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
RAD9AQ99638 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD9AQ99638 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.8■■□□□ 1.08
RAD9AQ99638 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RAD9AQ99638 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAD9AQ99638 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
RAD9AQ99638 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD9AQ99638 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD9AQ99638 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.79■■□□□ 1.08
RAD9AQ99638 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.79■■□□□ 1.08
RAD9AQ99638 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
RAD9AQ99638 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD9AQ99638 KRT8P9-201ENST00000558927 1449 ntBASIC21.79■■□□□ 1.08
RAD9AQ99638 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.79■■□□□ 1.08
RAD9AQ99638 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAD9AQ99638 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAD9AQ99638 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAD9AQ99638 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAD9AQ99638 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms