Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 AC009947.2-201ENST00000444014 672 ntBASIC20.57■□□□□ 0.88
PHOX2BQ99453 CDV3P1-201ENST00000471403 739 ntBASIC20.57■□□□□ 0.88
PHOX2BQ99453 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 REXO1L10P-201ENST00000615707 1290 ntBASIC20.57■□□□□ 0.88
PHOX2BQ99453 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 AC079416.2-201ENST00000625035 1193 ntBASIC20.57■□□□□ 0.88
PHOX2BQ99453 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.57■□□□□ 0.88
PHOX2BQ99453 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHOX2BQ99453 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 HTR7P1-201ENST00000538670 1336 ntBASIC20.56■□□□□ 0.88
PHOX2BQ99453 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHOX2BQ99453 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHOX2BQ99453 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHOX2BQ99453 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 AL034346.1-201ENST00000568244 1277 ntBASIC20.56■□□□□ 0.88
PHOX2BQ99453 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHOX2BQ99453 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
PHOX2BQ99453 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHOX2BQ99453 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 GPALPP1-207ENST00000611650 899 ntBASIC20.55■□□□□ 0.88
PHOX2BQ99453 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 AC092068.2-201ENST00000590491 1708 ntBASIC20.55■□□□□ 0.88
PHOX2BQ99453 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.55■□□□□ 0.88
PHOX2BQ99453 C1orf229-201ENST00000623686 2258 ntBASIC20.55■□□□□ 0.88
PHOX2BQ99453 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHOX2BQ99453 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
PHOX2BQ99453 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHOX2BQ99453 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.53■□□□□ 0.88
PHOX2BQ99453 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHOX2BQ99453 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms