Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.6■■□□□ 1.05
TWNKQ96RR1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.6■■□□□ 1.05
TWNKQ96RR1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.6■■□□□ 1.05
TWNKQ96RR1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.6■■□□□ 1.05
TWNKQ96RR1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TWNKQ96RR1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TWNKQ96RR1 AP005212.1-201ENST00000581547 1997 ntBASIC21.59■■□□□ 1.05
TWNKQ96RR1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 C2orf69P4-201ENST00000565394 541 ntBASIC21.59■■□□□ 1.05
TWNKQ96RR1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TWNKQ96RR1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TWNKQ96RR1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.58■■□□□ 1.05
TWNKQ96RR1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TWNKQ96RR1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TWNKQ96RR1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TWNKQ96RR1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.57■■□□□ 1.04
TWNKQ96RR1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.57■■□□□ 1.04
TWNKQ96RR1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.57■■□□□ 1.04
TWNKQ96RR1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TWNKQ96RR1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TWNKQ96RR1 AC092720.2-201ENST00000602388 1665 ntBASIC21.56■■□□□ 1.04
TWNKQ96RR1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TWNKQ96RR1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.56■■□□□ 1.04
TWNKQ96RR1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TWNKQ96RR1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 AC020907.5-201ENST00000624372 1936 ntBASIC21.55■■□□□ 1.04
TWNKQ96RR1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TWNKQ96RR1 AC097658.1-201ENST00000475555 843 ntBASIC21.55■■□□□ 1.04
TWNKQ96RR1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 LINC01006-201ENST00000333319 2292 ntBASIC21.55■■□□□ 1.04
TWNKQ96RR1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TWNKQ96RR1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TWNKQ96RR1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TWNKQ96RR1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TWNKQ96RR1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms