Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.16■□□□□ 0.66
COL21A1Q96P44 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 AC020907.5-201ENST00000624372 1936 ntBASIC19.15■□□□□ 0.66
COL21A1Q96P44 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL21A1Q96P44 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL21A1Q96P44 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL21A1Q96P44 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL21A1Q96P44 TERF1P5-201ENST00000477545 1207 ntBASIC19.15■□□□□ 0.66
COL21A1Q96P44 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 RARRES2P11-201ENST00000635158 484 ntBASIC19.15■□□□□ 0.66
COL21A1Q96P44 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL21A1Q96P44 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
COL21A1Q96P44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL21A1Q96P44 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL21A1Q96P44 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL21A1Q96P44 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
COL21A1Q96P44 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL21A1Q96P44 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL21A1Q96P44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL21A1Q96P44 AC080038.1-201ENST00000611274 1154 ntBASIC19.14■□□□□ 0.65
COL21A1Q96P44 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL21A1Q96P44 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL21A1Q96P44 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
COL21A1Q96P44 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 AL391422.3-201ENST00000603791 2761 ntBASIC19.13■□□□□ 0.65
COL21A1Q96P44 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 DUX4L16-201ENST00000555130 1264 ntBASIC19.13■□□□□ 0.65
COL21A1Q96P44 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 AC013268.1-206ENST00000638368 961 ntBASIC19.13■□□□□ 0.65
COL21A1Q96P44 AC112229.1-201ENST00000639295 961 ntBASIC19.13■□□□□ 0.65
COL21A1Q96P44 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.13■□□□□ 0.65
COL21A1Q96P44 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL21A1Q96P44 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL21A1Q96P44 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL21A1Q96P44 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.11■□□□□ 0.65
COL21A1Q96P44 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL21A1Q96P44 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms