Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF48Q96MX3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 KRT17P3-201ENST00000420566 1262 ntBASIC16.53■□□□□ 0.24
ZNF48Q96MX3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 C1QBPP2-201ENST00000528754 825 ntBASIC16.53■□□□□ 0.24
ZNF48Q96MX3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 AL137060.1-201ENST00000618151 2648 ntBASIC16.53■□□□□ 0.24
ZNF48Q96MX3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF48Q96MX3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 FAM197Y4-202ENST00000622692 608 ntBASIC16.52■□□□□ 0.24
ZNF48Q96MX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF48Q96MX3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF48Q96MX3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 RN7SL471P-201ENST00000580476 299 ntBASIC16.51■□□□□ 0.23
ZNF48Q96MX3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 AC069544.1-201ENST00000609399 999 ntBASIC16.51■□□□□ 0.23
ZNF48Q96MX3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF48Q96MX3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 SLC25A24-204ENST00000569674 2357 ntBASIC16.5■□□□□ 0.23
ZNF48Q96MX3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 C2orf69P4-201ENST00000565394 541 ntBASIC16.5■□□□□ 0.23
ZNF48Q96MX3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms