Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 AC116562.4-201ENST00000641316 2276 ntBASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC47A1Q96FL8 AC061975.6-201ENST00000579045 1553 ntBASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 AC105265.2-201ENST00000467189 838 ntBASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 AC053503.5-201ENST00000601508 636 ntBASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC47A1Q96FL8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 AL020996.1-203ENST00000536896 2307 ntBASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 EEF1DP3-203ENST00000566025 782 ntBASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC47A1Q96FL8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 AC018445.3-201ENST00000624177 1945 ntBASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC47A1Q96FL8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 MIR6084-201ENST00000622012 110 ntBASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC47A1Q96FL8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 MIR638-201ENST00000385237 100 ntBASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC47A1Q96FL8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms