Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 TMPOP1-202ENST00000424642 1267 ntBASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 AL355355.2-201ENST00000442321 338 ntBASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 CD177P1-201ENST00000606252 935 ntBASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 AL445228.2-201ENST00000605589 952 ntBASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRNP40Q96DI7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SNRNP40Q96DI7 MMP23A-201ENST00000234610 1017 ntBASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 AF186192.3-201ENST00000583427 947 ntBASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP40Q96DI7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 HTR7P1-201ENST00000538670 1336 ntBASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 RN7SL850P-201ENST00000579959 291 ntBASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP40Q96DI7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP40Q96DI7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms