Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 GCSHP5-201ENST00000443090 522 ntBASIC26.57■■□□□ 1.84
RTF1Q92541 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.57■■□□□ 1.84
RTF1Q92541 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.57■■□□□ 1.84
RTF1Q92541 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.57■■□□□ 1.84
RTF1Q92541 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RTF1Q92541 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.57■■□□□ 1.84
RTF1Q92541 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.56■■□□□ 1.84
RTF1Q92541 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
RTF1Q92541 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.56■■□□□ 1.84
RTF1Q92541 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RTF1Q92541 RPS2P52-201ENST00000469610 820 ntBASIC26.56■■□□□ 1.84
RTF1Q92541 AC142381.4-202ENST00000563973 229 ntBASIC26.56■■□□□ 1.84
RTF1Q92541 AC005829.2-201ENST00000571422 1056 ntBASIC26.56■■□□□ 1.84
RTF1Q92541 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.56■■□□□ 1.84
RTF1Q92541 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RTF1Q92541 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTF1Q92541 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.55■■□□□ 1.84
RTF1Q92541 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 AL158047.1-201ENST00000445918 881 ntBASIC26.55■■□□□ 1.84
RTF1Q92541 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.55■■□□□ 1.84
RTF1Q92541 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTF1Q92541 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.55■■□□□ 1.84
RTF1Q92541 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.55■■□□□ 1.84
RTF1Q92541 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.54■■□□□ 1.84
RTF1Q92541 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.54■■□□□ 1.84
RTF1Q92541 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RTF1Q92541 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.54■■□□□ 1.84
RTF1Q92541 AL390719.1-204ENST00000412397 1219 ntBASIC26.54■■□□□ 1.84
RTF1Q92541 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RTF1Q92541 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.54■■□□□ 1.84
RTF1Q92541 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.54■■□□□ 1.84
RTF1Q92541 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
RTF1Q92541 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTF1Q92541 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.53■■□□□ 1.84
RTF1Q92541 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.53■■□□□ 1.84
RTF1Q92541 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.53■■□□□ 1.84
RTF1Q92541 AC006557.6-201ENST00000623071 864 ntBASIC26.53■■□□□ 1.84
RTF1Q92541 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTF1Q92541 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.53■■□□□ 1.84
RTF1Q92541 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
RTF1Q92541 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.52■■□□□ 1.84
RTF1Q92541 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RTF1Q92541 POM121L13P-201ENST00000422362 380 ntBASIC26.52■■□□□ 1.84
RTF1Q92541 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.52■■□□□ 1.84
RTF1Q92541 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
RTF1Q92541 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.52■■□□□ 1.84
RTF1Q92541 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.52■■□□□ 1.84
RTF1Q92541 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTF1Q92541 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.51■■□□□ 1.84
RTF1Q92541 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.51■■□□□ 1.83
RTF1Q92541 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.51■■□□□ 1.83
RTF1Q92541 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RTF1Q92541 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.51■■□□□ 1.83
RTF1Q92541 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RTF1Q92541 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.51■■□□□ 1.83
RTF1Q92541 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RTF1Q92541 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTF1Q92541 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTF1Q92541 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTF1Q92541 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
RTF1Q92541 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.51■■□□□ 1.83
RTF1Q92541 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.51■■□□□ 1.83
RTF1Q92541 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms