Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX1Q92499 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX1Q92499 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX1Q92499 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 SLC25A24-204ENST00000569674 2357 ntBASIC21.67■■□□□ 1.06
DDX1Q92499 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
DDX1Q92499 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 CYP21A1P-202ENST00000354927 1481 ntBASIC21.67■■□□□ 1.06
DDX1Q92499 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX1Q92499 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.67■■□□□ 1.06
DDX1Q92499 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX1Q92499 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX1Q92499 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX1Q92499 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX1Q92499 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX1Q92499 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX1Q92499 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX1Q92499 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
DDX1Q92499 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX1Q92499 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX1Q92499 SLC29A4P1-201ENST00000398760 971 ntBASIC21.66■■□□□ 1.06
DDX1Q92499 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX1Q92499 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX1Q92499 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.66■■□□□ 1.06
DDX1Q92499 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DDX1Q92499 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.66■■□□□ 1.06
DDX1Q92499 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX1Q92499 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX1Q92499 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.65■■□□□ 1.06
DDX1Q92499 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DDX1Q92499 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
DDX1Q92499 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX1Q92499 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 AC087633.2-202ENST00000565166 1439 ntBASIC21.65■■□□□ 1.06
DDX1Q92499 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 AC099778.1-201ENST00000568593 1911 ntBASIC21.65■■□□□ 1.06
DDX1Q92499 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX1Q92499 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 RARRES2P4-201ENST00000514074 484 ntBASIC21.65■■□□□ 1.06
DDX1Q92499 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
DDX1Q92499 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX1Q92499 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX1Q92499 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.64■■□□□ 1.06
DDX1Q92499 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.64■■□□□ 1.06
DDX1Q92499 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX1Q92499 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
DDX1Q92499 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX1Q92499 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX1Q92499 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX1Q92499 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX1Q92499 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX1Q92499 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.64■■□□□ 1.05
DDX1Q92499 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX1Q92499 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX1Q92499 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX1Q92499 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX1Q92499 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX1Q92499 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX1Q92499 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX1Q92499 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
DDX1Q92499 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.63■■□□□ 1.05
DDX1Q92499 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.63■■□□□ 1.05
DDX1Q92499 MIR4651-201ENST00000582622 73 ntBASIC21.63■■□□□ 1.05
DDX1Q92499 AC008687.6-201ENST00000596318 630 ntBASIC21.63■■□□□ 1.05
DDX1Q92499 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX1Q92499 AC231657.2-201ENST00000624556 255 ntBASIC21.63■■□□□ 1.05
DDX1Q92499 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 AL391422.3-201ENST00000603791 2761 ntBASIC21.63■■□□□ 1.05
DDX1Q92499 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX1Q92499 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX1Q92499 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX1Q92499 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX1Q92499 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms