Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40AQ8WXH6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAB40AQ8WXH6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 AL020996.1-203ENST00000536896 2307 ntBASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40AQ8WXH6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 AL137784.2-201ENST00000607332 1000 ntBASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40AQ8WXH6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC005224.4-201ENST00000583262 1652 ntBASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC079140.4-201ENST00000507448 529 ntBASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 IKBKGP1-201ENST00000612193 1073 ntBASIC17.77■□□□□ 0.44
RAB40AQ8WXH6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms