Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD5Q8TDI0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD5Q8TDI0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.6■□□□□ 0.89
CHD5Q8TDI0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD5Q8TDI0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.59■□□□□ 0.89
CHD5Q8TDI0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 AP003097.1-201ENST00000530657 1135 ntBASIC20.59■□□□□ 0.89
CHD5Q8TDI0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.59■□□□□ 0.89
CHD5Q8TDI0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 ABHD17AP1-201ENST00000358206 933 ntBASIC20.59■□□□□ 0.89
CHD5Q8TDI0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD5Q8TDI0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 AC092368.3-202ENST00000574180 1591 ntBASIC20.58■□□□□ 0.89
CHD5Q8TDI0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD5Q8TDI0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD5Q8TDI0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD5Q8TDI0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD5Q8TDI0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD5Q8TDI0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms