Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 OR10C1-204ENST00000622521 1039 ntBASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGCLL1Q8TB92 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 AC090192.1-201ENST00000517740 490 ntBASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 AL050303.2-201ENST00000619798 666 ntBASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGCLL1Q8TB92 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 MIR663A-201ENST00000385250 93 ntBASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 AC069236.1-201ENST00000604339 616 ntBASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGCLL1Q8TB92 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 AL512625.2-201ENST00000417533 625 ntBASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 AC100791.3-201ENST00000617619 330 ntBASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 AC099778.1-201ENST00000568593 1911 ntBASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGCLL1Q8TB92 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 FP700111.2-201ENST00000619190 1892 ntBASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 AC008694.1-202ENST00000636953 945 ntBASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGCLL1Q8TB92 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms