Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 FP700111.2-201ENST00000619190 1892 ntBASIC17.65■□□□□ 0.42
CSNK2A3Q8NEV1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.64■□□□□ 0.42
CSNK2A3Q8NEV1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CSNK2A3Q8NEV1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 AC026271.2-201ENST00000428091 497 ntBASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 AC137761.2-201ENST00000561729 223 ntBASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 AC145350.3-201ENST00000569033 163 ntBASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK2A3Q8NEV1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 KRT18P5-201ENST00000436075 1291 ntBASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK2A3Q8NEV1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 MIR5787-201ENST00000611784 55 ntBASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 AC010536.3-201ENST00000620306 533 ntBASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK2A3Q8NEV1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 AL391422.3-201ENST00000603791 2761 ntBASIC17.61■□□□□ 0.41
CSNK2A3Q8NEV1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms