Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CFAP43Q8NDM7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 AL049597.2-201ENST00000565575 961 ntBASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 MIR6786-201ENST00000616843 113 ntBASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CFAP43Q8NDM7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CFAP43Q8NDM7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CFAP43Q8NDM7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC32.01■■■□□ 2.72
CFAP43Q8NDM7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC32.01■■■□□ 2.72
CFAP43Q8NDM7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 AC026471.5-201ENST00000615068 467 ntBASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFAP43Q8NDM7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC32■■■□□ 2.71
CFAP43Q8NDM7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC32■■■□□ 2.71
CFAP43Q8NDM7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC32■■■□□ 2.71
CFAP43Q8NDM7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC32■■■□□ 2.71
CFAP43Q8NDM7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC32■■■□□ 2.71
CFAP43Q8NDM7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC32■■■□□ 2.71
CFAP43Q8NDM7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CFAP43Q8NDM7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32■■■□□ 2.71
CFAP43Q8NDM7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.99■■■□□ 2.71
CFAP43Q8NDM7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 PGM5P4-201ENST00000421970 445 ntBASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 AC145285.6-201ENST00000604632 637 ntBASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC31.98■■■□□ 2.71
CFAP43Q8NDM7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 EP400NL-214ENST00000641289 2402 ntBASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CFAP43Q8NDM7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 AP003071.4-201ENST00000562276 1284 ntBASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CFAP43Q8NDM7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CFAP43Q8NDM7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms