Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 LINC00565-201ENST00000562710 2331 ntBASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 AC121338.2-201ENST00000622535 1744 ntBASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 RPS2P4-201ENST00000476944 856 ntBASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A9Q8NBW4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AL596275.1-201ENST00000423464 877 ntBASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 UBE2SP1-201ENST00000450587 669 ntBASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 AC120498.8-201ENST00000614275 531 ntBASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 MIR2861-201ENST00000636310 90 ntBASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SLC38A9Q8NBW4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 AC008550.1-201ENST00000511500 884 ntBASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A9Q8NBW4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A9Q8NBW4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms