Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 MIR1238-201ENST00000408483 83 ntBASIC15.91■□□□□ 0.14
C3orf56Q8N813 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 KRT16P5-201ENST00000455284 522 ntBASIC15.91■□□□□ 0.14
C3orf56Q8N813 NAPSB-206ENST00000562112 1266 ntBASIC15.91■□□□□ 0.14
C3orf56Q8N813 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
C3orf56Q8N813 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C3orf56Q8N813 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 NTF6B-201ENST00000591913 560 ntBASIC15.9■□□□□ 0.14
C3orf56Q8N813 AL031963.3-201ENST00000606441 850 ntBASIC15.9■□□□□ 0.14
C3orf56Q8N813 AC073195.1-201ENST00000607241 877 ntBASIC15.9■□□□□ 0.14
C3orf56Q8N813 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C3orf56Q8N813 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
C3orf56Q8N813 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
C3orf56Q8N813 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 AC087633.2-202ENST00000565166 1439 ntBASIC15.89■□□□□ 0.13
C3orf56Q8N813 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 RBM17P1-201ENST00000453646 1190 ntBASIC15.89■□□□□ 0.13
C3orf56Q8N813 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.89■□□□□ 0.13
C3orf56Q8N813 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.89■□□□□ 0.13
C3orf56Q8N813 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C3orf56Q8N813 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 AC087742.1-201ENST00000575880 1738 ntBASIC15.88■□□□□ 0.13
C3orf56Q8N813 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 AP000525.1-201ENST00000608286 694 ntBASIC15.88■□□□□ 0.13
C3orf56Q8N813 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
C3orf56Q8N813 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C3orf56Q8N813 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C3orf56Q8N813 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.87■□□□□ 0.13
C3orf56Q8N813 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C3orf56Q8N813 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C3orf56Q8N813 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C3orf56Q8N813 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms