Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 AC013268.1-206ENST00000638368 961 ntBASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 AC112229.1-201ENST00000639295 961 ntBASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.44■□□□□ 0.7
C1orf52Q8N6N3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 AL162430.1-201ENST00000480705 870 ntBASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 AC112907.3-201ENST00000577781 2400 ntBASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C1orf52Q8N6N3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 MIR5787-201ENST00000611784 55 ntBASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 AC099778.1-201ENST00000568593 1911 ntBASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 SMG8-203ENST00000578922 2178 ntBASIC19.42■□□□□ 0.7
C1orf52Q8N6N3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 AC007322.4-201ENST00000509611 723 ntBASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 AC016405.3-201ENST00000607710 860 ntBASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1orf52Q8N6N3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 AC006015.1-201ENST00000429970 570 ntBASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 AC011767.1-201ENST00000617410 1153 ntBASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1orf52Q8N6N3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms