Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 AL512408.1-201ENST00000569378 2000 ntBASIC16.49■□□□□ 0.23
LINC00311Q8N616 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 AL589743.5-201ENST00000616611 1050 ntBASIC16.49■□□□□ 0.23
LINC00311Q8N616 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.49■□□□□ 0.23
LINC00311Q8N616 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC00311Q8N616 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 AF201337.1-201ENST00000520239 748 ntBASIC16.48■□□□□ 0.23
LINC00311Q8N616 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC00311Q8N616 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC00311Q8N616 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 AC093787.1-201ENST00000450396 207 ntBASIC16.47■□□□□ 0.23
LINC00311Q8N616 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 AL050303.2-201ENST00000619798 666 ntBASIC16.47■□□□□ 0.23
LINC00311Q8N616 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC00311Q8N616 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00311Q8N616 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 DPP3P2-201ENST00000416030 1696 ntBASIC16.46■□□□□ 0.23
LINC00311Q8N616 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 MIR663A-201ENST00000385250 93 ntBASIC16.46■□□□□ 0.23
LINC00311Q8N616 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 AL355472.2-201ENST00000422958 438 ntBASIC16.46■□□□□ 0.23
LINC00311Q8N616 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00311Q8N616 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LINC00311Q8N616 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms