Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 AC092720.2-201ENST00000602388 1665 ntBASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 KRT18P6-201ENST00000555540 1265 ntBASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAM1L1Q8N609 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRAM1L1Q8N609 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TRAM1L1Q8N609 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 HLA-B-256ENST00000639848 1089 ntBASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAM1L1Q8N609 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAM1L1Q8N609 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms