Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FBXO39Q8N4B4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 AC011484.1-201ENST00000377652 1995 ntBASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 KRT18P29-201ENST00000397031 1267 ntBASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 AC008687.6-201ENST00000596318 630 ntBASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
FBXO39Q8N4B4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 AL512625.2-201ENST00000417533 625 ntBASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 AC016405.3-201ENST00000607710 860 ntBASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 FP700111.2-201ENST00000619190 1892 ntBASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FBXO39Q8N4B4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 AC093787.1-201ENST00000450396 207 ntBASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 ITM2C-210ENST00000620962 501 ntBASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 AC027702.1-201ENST00000563810 1770 ntBASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO39Q8N4B4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 AC093827.2-201ENST00000512654 315 ntBASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 AC092118.2-201ENST00000613495 667 ntBASIC20.22■□□□□ 0.83
FBXO39Q8N4B4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms