Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.64■□□□□ 0.89
PGBD3Q8N328 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.64■□□□□ 0.89
PGBD3Q8N328 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PGBD3Q8N328 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD3Q8N328 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD3Q8N328 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PGBD3Q8N328 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD3Q8N328 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PGBD3Q8N328 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD3Q8N328 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PGBD3Q8N328 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD3Q8N328 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.63■□□□□ 0.89
PGBD3Q8N328 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD3Q8N328 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PGBD3Q8N328 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD3Q8N328 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PGBD3Q8N328 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.63■□□□□ 0.89
PGBD3Q8N328 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PGBD3Q8N328 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 PGM5P4-201ENST00000421970 445 ntBASIC20.62■□□□□ 0.89
PGBD3Q8N328 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PGBD3Q8N328 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PGBD3Q8N328 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 FBXW4P1-201ENST00000426721 2239 ntBASIC20.61■□□□□ 0.89
PGBD3Q8N328 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PGBD3Q8N328 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
PGBD3Q8N328 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.6■□□□□ 0.89
PGBD3Q8N328 AC006557.6-201ENST00000623071 864 ntBASIC20.6■□□□□ 0.89
PGBD3Q8N328 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PGBD3Q8N328 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.6■□□□□ 0.89
PGBD3Q8N328 AC087633.2-202ENST00000565166 1439 ntBASIC20.6■□□□□ 0.89
PGBD3Q8N328 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.59■□□□□ 0.89
PGBD3Q8N328 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PGBD3Q8N328 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms