Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
LTBP4Q8N2S1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 AC004264.1-201ENST00000608354 794 ntBASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 KRT8P10-201ENST00000450021 1447 ntBASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 HMGA1P5-201ENST00000412453 271 ntBASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 AC092647.4-201ENST00000457211 535 ntBASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 DGCR10-201ENST00000609839 495 ntBASIC28.69■■■□□ 2.18
LTBP4Q8N2S1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 AC137767.1-201ENST00000602918 1920 ntBASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.68■■■□□ 2.18
LTBP4Q8N2S1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
LTBP4Q8N2S1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 AC142381.3-201ENST00000568208 1670 ntBASIC28.66■■■□□ 2.18
LTBP4Q8N2S1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 RN7SL510P-201ENST00000581311 263 ntBASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 KRT17P6-201ENST00000453795 1220 ntBASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.65■■■□□ 2.18
LTBP4Q8N2S1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 AC116050.2-201ENST00000612102 1779 ntBASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 AC026271.3-201ENST00000571884 352 ntBASIC28.64■■■□□ 2.18
LTBP4Q8N2S1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 AL356652.1-201ENST00000615962 565 ntBASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.63■■■□□ 2.17
LTBP4Q8N2S1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.62■■■□□ 2.17
LTBP4Q8N2S1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 KRT8P45-201ENST00000414328 1447 ntBASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
LTBP4Q8N2S1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms