Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
BEST3Q8N1M1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST3Q8N1M1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 AC128676.1-201ENST00000454392 318 ntBASIC18.84■□□□□ 0.61
BEST3Q8N1M1 PNMA6B-201ENST00000538162 1200 ntBASIC18.84■□□□□ 0.61
BEST3Q8N1M1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BEST3Q8N1M1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.83■□□□□ 0.61
BEST3Q8N1M1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.83■□□□□ 0.61
BEST3Q8N1M1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
BEST3Q8N1M1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.83■□□□□ 0.61
BEST3Q8N1M1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 PGM5P4-201ENST00000421970 445 ntBASIC18.83■□□□□ 0.6
BEST3Q8N1M1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BEST3Q8N1M1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 AC098590.1-201ENST00000468126 897 ntBASIC18.82■□□□□ 0.6
BEST3Q8N1M1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BEST3Q8N1M1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 C2orf69P4-201ENST00000565394 541 ntBASIC18.81■□□□□ 0.6
BEST3Q8N1M1 AC008403.3-201ENST00000598924 454 ntBASIC18.81■□□□□ 0.6
BEST3Q8N1M1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BEST3Q8N1M1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 RPS2P52-201ENST00000469610 820 ntBASIC18.8■□□□□ 0.6
BEST3Q8N1M1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 AL356652.1-201ENST00000615962 565 ntBASIC18.8■□□□□ 0.6
BEST3Q8N1M1 AC073648.6-201ENST00000641589 218 ntBASIC18.8■□□□□ 0.6
BEST3Q8N1M1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BEST3Q8N1M1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms