Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 RARRES2P10-201ENST00000564312 460 ntBASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEFF1Q8IYR6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.27■□□□□ 0.83
TMEFF1Q8IYR6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TMEFF1Q8IYR6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TMEFF1Q8IYR6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEFF1Q8IYR6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEFF1Q8IYR6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEFF1Q8IYR6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms