Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 AC142381.2-201ENST00000566120 298 ntBASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 MIR4767-201ENST00000582827 78 ntBASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 AL355001.2-201ENST00000620617 1191 ntBASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM42Q8IWZ5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 IGHV3-19-201ENST00000521488 291 ntBASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 EEF1DP3-203ENST00000566025 782 ntBASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM42Q8IWZ5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 AL031432.3-201ENST00000607698 485 ntBASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM42Q8IWZ5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 AL020996.1-203ENST00000536896 2307 ntBASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 SUDS3P1-201ENST00000505831 966 ntBASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 AC126544.1-201ENST00000580842 1059 ntBASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 AC233992.3-201ENST00000607491 485 ntBASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 AC061975.6-201ENST00000579045 1553 ntBASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM42Q8IWZ5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM42Q8IWZ5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms