Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 MIR2861-201ENST00000636310 90 ntBASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 AC018445.3-201ENST00000624177 1945 ntBASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.13■□□□□ 0.81
NUDCD3Q8IVD9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUDCD3Q8IVD9 AL020996.1-203ENST00000536896 2307 ntBASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUDCD3Q8IVD9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 AC245052.3-201ENST00000450182 901 ntBASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 AC027682.1-201ENST00000562846 899 ntBASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
NUDCD3Q8IVD9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 BX323043.1-201ENST00000641006 1765 ntBASIC20.09■□□□□ 0.81
NUDCD3Q8IVD9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms