Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF135Q8IUD6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 AC133681.1-201ENST00000465482 601 ntBASIC21.54■■□□□ 1.04
RNF135Q8IUD6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 AL023875.1-201ENST00000640777 796 ntBASIC21.54■■□□□ 1.04
RNF135Q8IUD6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF135Q8IUD6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 C2orf69P4-201ENST00000565394 541 ntBASIC21.53■■□□□ 1.04
RNF135Q8IUD6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF135Q8IUD6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 AL049597.2-201ENST00000565575 961 ntBASIC21.52■■□□□ 1.04
RNF135Q8IUD6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 AL590326.2-201ENST00000625139 305 ntBASIC21.52■■□□□ 1.04
RNF135Q8IUD6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF135Q8IUD6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RNF135Q8IUD6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.52■■□□□ 1.03
RNF135Q8IUD6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RNF135Q8IUD6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF135Q8IUD6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RNF135Q8IUD6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 AC239809.2-201ENST00000415381 517 ntBASIC21.49■■□□□ 1.03
RNF135Q8IUD6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF135Q8IUD6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF135Q8IUD6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms