Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRRTM4Q86VH4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 AL121603.2-201ENST00000557373 2117 ntBASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRTM4Q86VH4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRTM4Q86VH4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRTM4Q86VH4 AC092368.3-202ENST00000574180 1591 ntBASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRTM4Q86VH4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRTM4Q86VH4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms