Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.48■■□□□ 1.03
CCNI2Q6ZMN8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNI2Q6ZMN8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 AC006970.2-201ENST00000450065 779 ntBASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNI2Q6ZMN8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 AC010525.1-201ENST00000585559 441 ntBASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNI2Q6ZMN8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 AC125437.2-201ENST00000625180 2167 ntBASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 AP005435.1-201ENST00000529293 1178 ntBASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNI2Q6ZMN8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 CROCCP5-201ENST00000436658 830 ntBASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNI2Q6ZMN8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms