Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.26■■■□□ 2.59
CD109Q6YHK3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CD109Q6YHK3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CD109Q6YHK3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CD109Q6YHK3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CD109Q6YHK3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC31.24■■■□□ 2.59
CD109Q6YHK3 NIFKP9-201ENST00000419265 221 ntBASIC31.24■■■□□ 2.59
CD109Q6YHK3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC31.24■■■□□ 2.59
CD109Q6YHK3 AC022616.7-201ENST00000525383 220 ntBASIC31.24■■■□□ 2.59
CD109Q6YHK3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC31.24■■■□□ 2.59
CD109Q6YHK3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CD109Q6YHK3 AC004264.1-201ENST00000608354 794 ntBASIC31.24■■■□□ 2.59
CD109Q6YHK3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CD109Q6YHK3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CD109Q6YHK3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CD109Q6YHK3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
CD109Q6YHK3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CD109Q6YHK3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CD109Q6YHK3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CD109Q6YHK3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CD109Q6YHK3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC31.23■■■□□ 2.59
CD109Q6YHK3 KSR1P1-201ENST00000446298 240 ntBASIC31.23■■■□□ 2.59
CD109Q6YHK3 KRT126P-201ENST00000549467 1181 ntBASIC31.23■■■□□ 2.59
CD109Q6YHK3 MYC-208ENST00000641036 567 ntBASIC31.23■■■□□ 2.59
CD109Q6YHK3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CD109Q6YHK3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.22■■■□□ 2.59
CD109Q6YHK3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CD109Q6YHK3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CD109Q6YHK3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CD109Q6YHK3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC31.22■■■□□ 2.59
CD109Q6YHK3 CRYGFP-201ENST00000418459 633 ntBASIC31.22■■■□□ 2.59
CD109Q6YHK3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC31.22■■■□□ 2.59
CD109Q6YHK3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.22■■■□□ 2.59
CD109Q6YHK3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CD109Q6YHK3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.22■■■□□ 2.59
CD109Q6YHK3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CD109Q6YHK3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CD109Q6YHK3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CD109Q6YHK3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CD109Q6YHK3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 AC023632.3-201ENST00000521633 145 ntBASIC31.21■■■□□ 2.59
CD109Q6YHK3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 CR392000.1-201ENST00000624770 1228 ntBASIC31.21■■■□□ 2.59
CD109Q6YHK3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 KRT16P1-201ENST00000399124 1418 ntBASIC31.21■■■□□ 2.59
CD109Q6YHK3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC31.21■■■□□ 2.59
CD109Q6YHK3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CD109Q6YHK3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CD109Q6YHK3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.2■■■□□ 2.59
CD109Q6YHK3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.2■■■□□ 2.59
CD109Q6YHK3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.2■■■□□ 2.58
CD109Q6YHK3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
CD109Q6YHK3 AC027702.1-201ENST00000563810 1770 ntBASIC31.2■■■□□ 2.58
CD109Q6YHK3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CD109Q6YHK3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CD109Q6YHK3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CD109Q6YHK3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CD109Q6YHK3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CD109Q6YHK3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CD109Q6YHK3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CD109Q6YHK3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC31.18■■■□□ 2.58
CD109Q6YHK3 AC063952.2-201ENST00000498792 1227 ntBASIC31.18■■■□□ 2.58
CD109Q6YHK3 KRT18P56-201ENST00000507275 550 ntBASIC31.18■■■□□ 2.58
CD109Q6YHK3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CD109Q6YHK3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.18■■■□□ 2.58
CD109Q6YHK3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.18■■■□□ 2.58
CD109Q6YHK3 FAM99A-202ENST00000538190 1989 ntBASIC31.17■■■□□ 2.58
CD109Q6YHK3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31.17■■■□□ 2.58
CD109Q6YHK3 LIN28AP1-201ENST00000429574 405 ntBASIC31.17■■■□□ 2.58
CD109Q6YHK3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CD109Q6YHK3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CD109Q6YHK3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC31.16■■■□□ 2.58
CD109Q6YHK3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.16■■■□□ 2.58
CD109Q6YHK3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CD109Q6YHK3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.16■■■□□ 2.58
CD109Q6YHK3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CD109Q6YHK3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CD109Q6YHK3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CD109Q6YHK3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC31.15■■■□□ 2.58
CD109Q6YHK3 ATP5G1P1-201ENST00000448724 379 ntBASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms