Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 MYC-209ENST00000641252 345 ntBASIC21.26■□□□□ 0.99
RNF43Q68DV7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF43Q68DV7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF43Q68DV7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF43Q68DV7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF43Q68DV7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 DUSP5P2-201ENST00000426873 1033 ntBASIC21.24■□□□□ 0.99
RNF43Q68DV7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF43Q68DV7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF43Q68DV7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 AC007322.3-201ENST00000426526 701 ntBASIC21.23■□□□□ 0.99
RNF43Q68DV7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 AC098590.1-201ENST00000468126 897 ntBASIC21.23■□□□□ 0.99
RNF43Q68DV7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF43Q68DV7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF43Q68DV7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 BX276092.2-201ENST00000417668 665 ntBASIC21.22■□□□□ 0.99
RNF43Q68DV7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF43Q68DV7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF43Q68DV7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF43Q68DV7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF43Q68DV7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF43Q68DV7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RNF43Q68DV7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF43Q68DV7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF43Q68DV7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms