Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39BQ5VTQ0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
TTC39BQ5VTQ0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TTC39BQ5VTQ0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 LSM12P1-201ENST00000411836 588 ntBASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 AL589743.5-201ENST00000616611 1050 ntBASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39BQ5VTQ0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39BQ5VTQ0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 KRT18P68-201ENST00000392293 1000 ntBASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC39BQ5VTQ0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 AC006128.1-201ENST00000624704 1661 ntBASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC39BQ5VTQ0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms