Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARFGEF3Q5TH69 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 CLDN5-201ENST00000403084 2357 ntBASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 UNC93B4-201ENST00000505679 747 ntBASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.27■□□□□ 0.36
ARFGEF3Q5TH69 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARFGEF3Q5TH69 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARFGEF3Q5TH69 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARFGEF3Q5TH69 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AC008550.1-201ENST00000511500 884 ntBASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 C1QBPP2-201ENST00000528754 825 ntBASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 AL359736.2-201ENST00000621992 437 ntBASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ARFGEF3Q5TH69 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 AC079834.2-201ENST00000609776 1949 ntBASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 AC012618.2-201ENST00000428058 849 ntBASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 C2orf69P4-201ENST00000565394 541 ntBASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 MTDHP1-201ENST00000605323 784 ntBASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.25■□□□□ 0.35
ARFGEF3Q5TH69 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms