Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 AC120114.3-201ENST00000611923 658 ntBASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 AL445675.2-201ENST00000620291 557 ntBASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 AC141257.4-201ENST00000634557 245 ntBASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 AC136944.6-201ENST00000634818 245 ntBASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL13A1Q5TAT6 LINC00526-201ENST00000581067 1875 ntBASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.17■■□□□ 1.3
COL13A1Q5TAT6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 AC079781.3-201ENST00000449110 356 ntBASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL13A1Q5TAT6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 MIR574-201ENST00000385209 96 ntBASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 SLC25A6P4-201ENST00000586535 553 ntBASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 IFNL4P1-201ENST00000607083 540 ntBASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 FSCN1P1-201ENST00000568912 1481 ntBASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL13A1Q5TAT6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL13A1Q5TAT6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.14■■□□□ 1.3
COL13A1Q5TAT6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
COL13A1Q5TAT6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
COL13A1Q5TAT6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL13A1Q5TAT6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 KRT18P38-201ENST00000449496 1282 ntBASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 PRSS44-201ENST00000515154 1146 ntBASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 AC027796.2-201ENST00000575326 344 ntBASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 AC092329.2-201ENST00000598402 547 ntBASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.14■■□□□ 1.29
COL13A1Q5TAT6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL13A1Q5TAT6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 AC097488.1-201ENST00000507834 756 ntBASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 AC106795.1-205ENST00000512851 1056 ntBASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.12■■□□□ 1.29
COL13A1Q5TAT6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms