Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 AC120498.8-201ENST00000614275 531 ntBASIC21.59■■□□□ 1.05
VARS2Q5ST30 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
VARS2Q5ST30 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VARS2Q5ST30 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 AL390719.1-204ENST00000412397 1219 ntBASIC21.58■■□□□ 1.05
VARS2Q5ST30 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.58■■□□□ 1.05
VARS2Q5ST30 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VARS2Q5ST30 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
VARS2Q5ST30 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.58■■□□□ 1.04
VARS2Q5ST30 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.58■■□□□ 1.04
VARS2Q5ST30 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VARS2Q5ST30 AC008550.1-201ENST00000511500 884 ntBASIC21.57■■□□□ 1.04
VARS2Q5ST30 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VARS2Q5ST30 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VARS2Q5ST30 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.56■■□□□ 1.04
VARS2Q5ST30 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 MTDHP1-201ENST00000605323 784 ntBASIC21.55■■□□□ 1.04
VARS2Q5ST30 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.55■■□□□ 1.04
VARS2Q5ST30 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VARS2Q5ST30 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms