Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.61■■□□□ 1.85
NCBP3Q53F19 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.61■■□□□ 1.85
NCBP3Q53F19 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.61■■□□□ 1.85
NCBP3Q53F19 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCBP3Q53F19 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 MIPEPP3-201ENST00000412105 444 ntBASIC26.6■■□□□ 1.85
NCBP3Q53F19 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NCBP3Q53F19 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.6■■□□□ 1.85
NCBP3Q53F19 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NCBP3Q53F19 DET1-207ENST00000564406 2315 ntTSL 2 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NCBP3Q53F19 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 AC090192.1-201ENST00000517740 490 ntBASIC26.59■■□□□ 1.85
NCBP3Q53F19 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NCBP3Q53F19 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.59■■□□□ 1.85
NCBP3Q53F19 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
NCBP3Q53F19 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.58■■□□□ 1.85
NCBP3Q53F19 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NCBP3Q53F19 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.58■■□□□ 1.85
NCBP3Q53F19 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.58■■□□□ 1.85
NCBP3Q53F19 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.58■■□□□ 1.85
NCBP3Q53F19 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCBP3Q53F19 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 PTBP1P-201ENST00000554374 1601 ntBASIC26.57■■□□□ 1.84
NCBP3Q53F19 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NCBP3Q53F19 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 C2orf69P4-201ENST00000565394 541 ntBASIC26.57■■□□□ 1.84
NCBP3Q53F19 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.57■■□□□ 1.84
NCBP3Q53F19 AC137695.1-201ENST00000604126 489 ntBASIC26.57■■□□□ 1.84
NCBP3Q53F19 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.57■■□□□ 1.84
NCBP3Q53F19 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 AC142086.2-201ENST00000569753 217 ntBASIC26.56■■□□□ 1.84
NCBP3Q53F19 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.56■■□□□ 1.84
NCBP3Q53F19 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCBP3Q53F19 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NCBP3Q53F19 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NCBP3Q53F19 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NCBP3Q53F19 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC26.55■■□□□ 1.84
NCBP3Q53F19 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NCBP3Q53F19 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NCBP3Q53F19 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
NCBP3Q53F19 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms