Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDH17Q12864 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH17Q12864 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH17Q12864 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH17Q12864 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH17Q12864 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH17Q12864 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH17Q12864 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH17Q12864 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH17Q12864 AC087633.2-202ENST00000565166 1439 ntBASIC20.53■□□□□ 0.88
CDH17Q12864 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDH17Q12864 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH17Q12864 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDH17Q12864 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH17Q12864 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDH17Q12864 DUX4L16-201ENST00000555130 1264 ntBASIC20.52■□□□□ 0.88
CDH17Q12864 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH17Q12864 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.52■□□□□ 0.88
CDH17Q12864 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH17Q12864 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.52■□□□□ 0.88
CDH17Q12864 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDH17Q12864 AC016405.3-201ENST00000607710 860 ntBASIC20.52■□□□□ 0.88
CDH17Q12864 AC011767.1-201ENST00000617410 1153 ntBASIC20.52■□□□□ 0.88
CDH17Q12864 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDH17Q12864 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDH17Q12864 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDH17Q12864 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.51■□□□□ 0.87
CDH17Q12864 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.51■□□□□ 0.87
CDH17Q12864 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CDH17Q12864 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 CYP21A1P-202ENST00000354927 1481 ntBASIC20.51■□□□□ 0.87
CDH17Q12864 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH17Q12864 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH17Q12864 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.51■□□□□ 0.87
CDH17Q12864 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH17Q12864 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDH17Q12864 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH17Q12864 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH17Q12864 AC099778.1-201ENST00000568593 1911 ntBASIC20.51■□□□□ 0.87
CDH17Q12864 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH17Q12864 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDH17Q12864 AL391422.3-201ENST00000603791 2761 ntBASIC20.5■□□□□ 0.87
CDH17Q12864 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH17Q12864 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 CNN2P6-201ENST00000439038 900 ntBASIC20.5■□□□□ 0.87
CDH17Q12864 AL356652.1-201ENST00000615962 565 ntBASIC20.5■□□□□ 0.87
CDH17Q12864 BID-214ENST00000617586 542 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH17Q12864 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH17Q12864 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH17Q12864 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH17Q12864 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH17Q12864 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 SMG8-203ENST00000578922 2178 ntBASIC20.49■□□□□ 0.87
CDH17Q12864 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.49■□□□□ 0.87
CDH17Q12864 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH17Q12864 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDH17Q12864 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CDH17Q12864 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH17Q12864 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH17Q12864 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.49■□□□□ 0.87
CDH17Q12864 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDH17Q12864 AC068338.2-201ENST00000563278 1430 ntBASIC20.49■□□□□ 0.87
CDH17Q12864 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH17Q12864 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms