Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP1S1P61966 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.47■□□□□ 0.87
AP1S1P61966 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S1P61966 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S1P61966 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.47■□□□□ 0.87
AP1S1P61966 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.47■□□□□ 0.87
AP1S1P61966 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.47■□□□□ 0.87
AP1S1P61966 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.47■□□□□ 0.87
AP1S1P61966 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S1P61966 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S1P61966 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.47■□□□□ 0.87
AP1S1P61966 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.47■□□□□ 0.87
AP1S1P61966 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.47■□□□□ 0.87
AP1S1P61966 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.47■□□□□ 0.87
AP1S1P61966 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S1P61966 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.47■□□□□ 0.87
AP1S1P61966 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.46■□□□□ 0.87
AP1S1P61966 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.46■□□□□ 0.87
AP1S1P61966 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.46■□□□□ 0.87
AP1S1P61966 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S1P61966 AC092720.2-201ENST00000602388 1665 ntBASIC20.45■□□□□ 0.86
AP1S1P61966 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.45■□□□□ 0.86
AP1S1P61966 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
AP1S1P61966 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
AP1S1P61966 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
AP1S1P61966 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.45■□□□□ 0.86
AP1S1P61966 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.45■□□□□ 0.86
AP1S1P61966 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
AP1S1P61966 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.45■□□□□ 0.86
AP1S1P61966 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
AP1S1P61966 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S1P61966 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AP1S1P61966 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.44■□□□□ 0.86
AP1S1P61966 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.44■□□□□ 0.86
AP1S1P61966 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.44■□□□□ 0.86
AP1S1P61966 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.44■□□□□ 0.86
AP1S1P61966 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
AP1S1P61966 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.44■□□□□ 0.86
AP1S1P61966 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S1P61966 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.43■□□□□ 0.86
AP1S1P61966 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.43■□□□□ 0.86
AP1S1P61966 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.43■□□□□ 0.86
AP1S1P61966 HLA-B-256ENST00000639848 1089 ntBASIC20.43■□□□□ 0.86
AP1S1P61966 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
AP1S1P61966 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.43■□□□□ 0.86
AP1S1P61966 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S1P61966 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.43■□□□□ 0.86
AP1S1P61966 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.42■□□□□ 0.86
AP1S1P61966 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
AP1S1P61966 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.42■□□□□ 0.86
AP1S1P61966 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP1S1P61966 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.42■□□□□ 0.86
AP1S1P61966 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms