Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 NOC2LP2-201ENST00000407594 1944 ntBASIC12.23□□□□□ -0.45
TMEM258P61165 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM258P61165 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM258P61165 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM258P61165 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM258P61165 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM258P61165 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.23□□□□□ -0.45
TMEM258P61165 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TMEM258P61165 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM258P61165 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
TMEM258P61165 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TMEM258P61165 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 AC126755.1-201ENST00000525846 6405 ntBASIC12.22□□□□□ -0.45
TMEM258P61165 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
TMEM258P61165 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM258P61165 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM258P61165 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM258P61165 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
TMEM258P61165 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM258P61165 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM258P61165 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 ME2-216ENST00000639850 2331 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM258P61165 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM258P61165 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM258P61165 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 AC008894.3-201ENST00000624324 3103 ntBASIC12.22□□□□□ -0.45
TMEM258P61165 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM258P61165 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TMEM258P61165 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TMEM258P61165 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM258P61165 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM258P61165 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM258P61165 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TMEM258P61165 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM258P61165 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM258P61165 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.21□□□□□ -0.45
TMEM258P61165 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.21□□□□□ -0.46
TMEM258P61165 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TMEM258P61165 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.21□□□□□ -0.46
TMEM258P61165 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 AL596257.1-201ENST00000641463 2694 ntBASIC12.21□□□□□ -0.46
TMEM258P61165 AL365209.1-201ENST00000624418 6473 ntBASIC12.21□□□□□ -0.46
TMEM258P61165 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM258P61165 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.21□□□□□ -0.46
TMEM258P61165 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM258P61165 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM258P61165 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM258P61165 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM258P61165 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM258P61165 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms