Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.47■□□□□ 0.23
SPCS3P61009 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.47■□□□□ 0.23
SPCS3P61009 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.47■□□□□ 0.23
SPCS3P61009 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.47■□□□□ 0.23
SPCS3P61009 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.47■□□□□ 0.23
SPCS3P61009 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.47■□□□□ 0.23
SPCS3P61009 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SPCS3P61009 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SPCS3P61009 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.46■□□□□ 0.23
SPCS3P61009 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SPCS3P61009 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SPCS3P61009 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.46■□□□□ 0.23
SPCS3P61009 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
SPCS3P61009 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
SPCS3P61009 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.46■□□□□ 0.23
SPCS3P61009 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.46■□□□□ 0.23
SPCS3P61009 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
SPCS3P61009 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPCS3P61009 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SPCS3P61009 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPCS3P61009 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPCS3P61009 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPCS3P61009 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPCS3P61009 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.46■□□□□ 0.22
SPCS3P61009 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 AC112907.3-201ENST00000577781 2400 ntBASIC16.45■□□□□ 0.22
SPCS3P61009 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.45■□□□□ 0.22
SPCS3P61009 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
SPCS3P61009 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SPCS3P61009 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPCS3P61009 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SPCS3P61009 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SPCS3P61009 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 RASA4CP-201ENST00000424092 1398 ntBASIC16.44■□□□□ 0.22
SPCS3P61009 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.44■□□□□ 0.22
SPCS3P61009 EDA-201ENST00000338901 1233 ntBASIC16.44■□□□□ 0.22
SPCS3P61009 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPCS3P61009 PBX2P1-201ENST00000493219 1291 ntBASIC16.44■□□□□ 0.22
SPCS3P61009 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.44■□□□□ 0.22
SPCS3P61009 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SPCS3P61009 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SPCS3P61009 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.44■□□□□ 0.22
SPCS3P61009 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.43■□□□□ 0.22
SPCS3P61009 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SPCS3P61009 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPCS3P61009 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPCS3P61009 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms