Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SUMO3P55854 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.42■□□□□ 0.54
SUMO3P55854 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.42■□□□□ 0.54
SUMO3P55854 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.42■□□□□ 0.54
SUMO3P55854 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
SUMO3P55854 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.42■□□□□ 0.54
SUMO3P55854 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SUMO3P55854 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SUMO3P55854 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.41■□□□□ 0.54
SUMO3P55854 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.41■□□□□ 0.54
SUMO3P55854 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 MIR4758-201ENST00000577688 71 ntBASIC18.41■□□□□ 0.54
SUMO3P55854 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SUMO3P55854 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
SUMO3P55854 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SUMO3P55854 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SUMO3P55854 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
SUMO3P55854 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.41■□□□□ 0.54
SUMO3P55854 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
SUMO3P55854 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SUMO3P55854 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 C2orf69P4-201ENST00000565394 541 ntBASIC18.4■□□□□ 0.54
SUMO3P55854 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SUMO3P55854 AL109923.1-201ENST00000618799 583 ntBASIC18.4■□□□□ 0.54
SUMO3P55854 LINC01521-201ENST00000504184 1943 ntBASIC18.4■□□□□ 0.54
SUMO3P55854 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SUMO3P55854 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
SUMO3P55854 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.4■□□□□ 0.54
SUMO3P55854 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SUMO3P55854 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
SUMO3P55854 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SUMO3P55854 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.39■□□□□ 0.53
SUMO3P55854 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.39■□□□□ 0.53
SUMO3P55854 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.39■□□□□ 0.53
SUMO3P55854 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SUMO3P55854 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.39■□□□□ 0.53
SUMO3P55854 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SUMO3P55854 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SUMO3P55854 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SUMO3P55854 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.39■□□□□ 0.53
SUMO3P55854 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.39■□□□□ 0.53
SUMO3P55854 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.39■□□□□ 0.53
SUMO3P55854 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SUMO3P55854 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SUMO3P55854 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SUMO3P55854 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.38■□□□□ 0.53
SUMO3P55854 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.38■□□□□ 0.53
SUMO3P55854 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms